| Protein: | SKI16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKI16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
354.0 | [0..1] | [434..11] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MGLEDAGDLV LHIVLSKIGP ENTARVACVS KRLKVSASEE SLWSIFCSND LNISTPLDPH 60
61 GDPAPSFKRA YQLWRESFRM YPWNLVKRVR LCWDNLKQWL TLNFPEAKAT LRKGVTEDDL 120
121 QEFETSLKVK LPLPTRLLYR FVDGQELSSP NGLDGSLGLI GGYSAYSHDV NVYLLPLKEV 180
181 MRETKESFMR DLGFSSRLDL IVMAASVVAS LKIFLLDCTT GQLFTGTSNR QLLPCVPDAL 240
241 VRSVHDTNGD QQQDAMLLWL EEHGRRLQTG TINVRQQNNV KSISLFPEIP P
|
| Detection Method: |  |
| Confidence: | 35.69897 |
| Match: | 1fs2A |
| Description: | Skp2; Cyclin A/CDK2-associated p19, Skp2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [292-436] |
1 11 21 31 41 51
| | | | | |
1 LCSVSVTNGV QVRASSVFIP EISNLRDQPP AYWYAYSIRM SLMPEGCILN GTHHSSCQLY 60
61 WRHWVIRADN EVIDNVNGEA VIGKYPLLQA GEEEFVYESC SSFPTTAGSI DGSFTFVPGS 120
121 LRDPKGSQFE VKVVEFPLEL PDYIF
|
| Detection Method: | |
| Confidence: | 44.39794 |
| Match: | 1xq4A |
| Description: | Crystal Structure of the Putative ApaA Protein from Bordetella pertussis, Northeast Structural Genomics Target BeR40 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.295853503406924 | bayes_pls_golite062009 |
