| Protein: | PLA16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLA16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..1] | [528..1] |
|
|
327.0 | [0..102] | [510..12] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MAAIPSHNNL LTINHKNSIT GSSSLNTNFS EINFPAKFRV ATRALSRTDE SSLSAVISRL 60
61 ERERRERQGL LIEEAEGAGE LWMTAEDIRR RDKKTEEERR LRDTWRKIQG EDDWAGLMDP 120
121 MDPILRSELI RYGEMAQACY DAFDFDPASK Y
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [152-451] |
1 11 21 31 41 51
| | | | | |
1 CGTSRFTRLE FFDSLGMIDS GYEVARYLYA TSNINLPNFF SKSRWSKVWS KNANWMGYVA 60
61 VSDDETSRNR LGRRDIAIAW RGTVTKLEWI ADLKDYLKPV TENKIRCPDP AVKVESGFLD 120
121 LYTDKDTTCK FARFSAREQI LTEVKRLVEE HGDDDDSDLS ITVTGHSLGG ALAILSAYDI 180
181 AEMRLNRSKK GKVIPVTVLT YGGPRVGNVR FRERMEELGV KVMRVVNVHD VVPKSPGLFL 240
241 NESRPHALMK IAEGLPWCYS HVGEELALDH QNSPFLKPSV DVSTAHNLEA MLHLLDGYHG 300
301
|
| Detection Method: | |
| Confidence: | 48.0 |
| Match: | 4tglA |
| Description: | CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [452-529] |
1 11 21 31 41 51
| | | | | |
1 KGERFVLSSG RDHALVNKAS DFLKEHLQIP PFWRQDANKG MVRNSEGRWI QAERLRFEDH 60
61 HSPDIHHHLS QLRLDHPC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.599 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.580 | d.120.1 | Cytochrome b5 |
| View | Download | 0.580 | d.120.1 | Cytochrome b5 |
| View | Download | 0.572 | d.120.1 | Cytochrome b5 |
| View | Download | 0.572 | d.120.1 | Cytochrome b5 |
| View | Download | 0.568 | b.11.1 | gamma-Crystallin-like |
| View | Download | 0.564 | a.77.1 | DEATH domain |
| View | Download | 0.529 | a.77.1 | DEATH domain |
| View | Download | 0.529 | a.77.1 | DEATH domain |
