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View Structure Prediction Details

Protein: JAR1_ARATH
Organism: Arabidopsis thaliana
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|4887010 - gi|4887010|gb|AAD32141.1|AF123503_1 Nt-gh3 deduced protein [Nicotiana tabacum]
769.0 [0..11] [575..20]

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Predicted Domain #1
Region A:
Residues: [1-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEKVETFDM NRVIDEFDEM TRNAHQVQKQ TLKEILLKNQ SAIYLQNCGL NGNATDPEEA  60
   61 FKSMVPLVTD VELEPYIKRM VDGDTSPILT GHPVPAISLS SGTSQGRPKF IPFTDELMEN 120
  121 TLQLFRTAFA FRNRDFPIDD NGKALQFIFS SKQYISTGGV PVGTATTNVY RNPNFKAGMK 180
  181 SITSPSCSPD EVIFSPDVHQ ALYCHLLSGI LFRDQVQYVF AVFAHGLVHA FRTFEQVWEE 240
  241 IVTDIKDGVL SNRITVPSVR TAMSKLLTPN PELAETIRTK CMSLSNWYGL IPALFPNAKY 300
  301 VYGIMTGSME PYVPKLRHYA GDLPLVSHDY GSSEGWIAAN VTPRLSPEEA TFAVIPNLGY 360
  361 FEFLPVSETG EGEEKPVGLT QVKIGEEYEV VITNYAGLYR YRLGDVVKVI GFYNNTPQLK 420
  421 FICRRNLILS INIDKNTERD LQLSVESAAK RLSEEKIEVI DFSSYIDVST DPGHYAIFWE 480
  481 ISGETNEDVL QDCCNCLDRA FIDAGYVSSR KCKTIGALEL RVVAKGTFRK IQEHFLGLGS 540
  541 SAGQFKMPRC VKPSNAKVLQ ILCENVVSSY FSTAF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.39
Match: 1pg3A
Description: Acetyl-CoA synthetase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle