| Protein: | RKF3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 617 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RKF3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
369.0 | [0..1] | [579..5] |
|
Region A: Residues: [1-179] |
1 11 21 31 41 51
| | | | | |
1 MLFLRRIAVV FFVFTSFSAA QNSTCPLDFS VLEPFRRPKP DGATTCQYLL QGLRLLYSHH 60
61 LRQTGSFLPP PESAASCWAA LQSSVAGFLP RFDVRSTCGF QTPWISQGCM DITTRSQFES 120
121 LIPNSSLATT AMRCNTSLES NTPCASCTQS LSAFQPYLSG PSLGNVSDCA SFPSIYAAA
|
| Detection Method: |  |
| Confidence: | 4.30103 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [180-258] |
1 11 21 31 41 51
| | | | | |
1 FANSLGPTDK GTAKCLFQLD LASPTSSGAN KVKVLVSSFS VLLVASVLVI TAWFWYCRRK 60
61 KSKLLKPRDT SLEAGTQSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [259-617] |
1 11 21 31 41 51
| | | | | |
1 LDSMSESTTL VKFSFDEIKK ATNNFSRHNI IGRGGYGNVF KGALPDGTQV AFKRFKNCSA 60
61 GGDANFAHEV EVIASIRHVN LLALRGYCTA TTPYEGHQRI IVCDLVSNGS LHDHLFGDLE 120
121 AQLAWPLRQR IALGMARGLA YLHYGAQPSI IHRDIKASNI LLDERFEAKV ADFGLAKFNP 180
181 EGMTHMSTRV AGTMGYVAPE YALYGQLTEK SDVYSFGVVL LELLSRRKAI VTDEEGQPVS 240
241 VADWAWSLVR EGQTLDVVED GMPEKGPPEV LEKYVLIAVL CSHPQLHARP TMDQVVKMLE 300
301 SNEFTVIAIP QRPIPLVACR EEIDRSVSSS SGSGKLTSPT GYQAFSFGGD GPSGNTNTT
|
| Detection Method: | |
| Confidence: | 71.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
