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View Structure Prediction Details

Protein: SYLM_ARATH
Organism: Arabidopsis thaliana
Length: 973 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SYLM_ARATH.

Predicted Domain #1
Region A:
Residues: [1-80] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHHQILQI RSDPFVLSHC CRHTRLTSSL TLQSPLKQPF SCLPFRWRRS YRGGVRSSTT  60
   61 ETHGSKKEAL VSETATTSIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.39794
Match: 1iq0A
Description: Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [81-973] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKRVYPFHEI EPKWQRYWED NRIFRTPDDV DTSKPKFYVL DMFPYPSGAG LHVGHPLGYT  60
   61 ATDILARLRR MQGYNVLHPM GWDAFGLPAE QYAIETGTHP KTTTLKNIDR FRLQLKSLGF 120
  121 SYDWDRELST TEPDYYKWTQ WIFLQLYKKG LAYQAEVPVN WCPALGTVLA NEEVVDGVSE 180
  181 RGGHPVIRKP MRQWMLKITA YADRLLEDLD ELEWPESIKE MQRNWIGRSE GAELNFSILD 240
  241 GEGRETDKEI TVYTTRPDTL FGATYMVVAP EHQLLSYFVT AEQKQQVEEY KDFASRKSDL 300
  301 ERTELQKDKT GVFTGCYAKN PANGDAIPIW VADYVLASYG TGAIMAVPAH DTRDNEFALK 360
  361 YNIPIKWVVR NEANSSDDAK QVYPGLGIIE NSSTLETGLD INQLSSKEAA LKVIEWAERT 420
  421 GNGKKKVNYK LRDWLFARQR YWGEPIPILI LDESGETIAI SESELPLTLP ELNDFTPTGT 480
  481 GEPPLSKAVS WVNTVDPSTG KPAKRETSTM PQWAGSCWYY LRFMDPKNPE ALVDKEKEKY 540
  541 WSPVDVYVGG AEHAVLHLLY SRFWHKVLYD IGVVSTKEPF KCVINQGIIL GEVQYTAWKD 600
  601 QEGNYVSADT EERLNEHQQV TIPEEKVIKS GDHFVLKEDP SIRLIPRVYK MSKSRGNVVN 660
  661 PDDVVLEYGA DSLRLYEMFM GPFRDSKTWN TSGIEGVHRF LARTWRLVIG LPQSDGSFKD 720
  721 GTLVTDDEPT LEQLRTLHKC IAKVTEEIES TRFNTGISGM MEFVNAAYKW NNQPRGIIEP 780
  781 FVLLLSPYAP HMAEELWSRL GHPNSLAYES FPKANPDYLK NTTIVLPVQI NGKTRGTIEV 840
  841 EEGCSEDDAF VLASQDDKLR KYLDGQSIKK RIYVPGKILN VILDRTNVKV TTK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1h3nA
Description: Leucyl-tRNA synthetase (LeuRS)
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle