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View Structure Prediction Details

Protein: DTX29_ARATH
Organism: Arabidopsis thaliana
Length: 500 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX29_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
324.0 [0..32] [497..632]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKDKDITET LLTAAEERSD LPFLSVDDIP PITTVGGFVR EFNVETKKLW YLAGPAIFTS  60
   61 VNQYSLGAIT QVFAGHISTI ALAAVSVENS VVAGFSFGIM LGMGSALETL CGQAFGAGKL 120
  121 SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA 180
  181 INFPTAKFLQ SQSKIMVMAV ISAVALVIHV PLTWFVIVKL Q

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 38.259637
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [222-500]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WGMPGLAVVL NASWCFIDMA QLVYIFSGTC GEAWSGFSWE AFHNLWSFVR LSLASAVMLC  60
   61 LEVWYFMAII LFAGYLKNAE ISVAALSICM NILGWTAMIA IGMNTAVSVR VSNELGANHP 120
  121 RTAKFSLLVA VITSTLIGFI VSMILLIFRD QYPSLFVKDE KVIILVKELT PILALSIVIN 180
  181 NVQPVLSGVA VGAGWQAVVA YVNIACYYVF GIPFGLLLGY KLNYGVMGIW CGMLTGTVVQ 240
  241 TIVLTWMICK TNWDTEASMA EDRIREWGGE VSEIKQLIN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 47.585027
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle