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View Structure Prediction Details

Protein: gi|15227500, gi|...
Organism: Arabidopsis thaliana
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15227500, gi|....

Description E-value Query
Range
Subject
Range
gi|145009872, gi... - gi|39942970|ref|XP_361022.1| hypothetical protein MGG_03565 [Magnaporthe grisea 70-15], gb|EAA51970....
166.0 [0..1] [262..220]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAAIRAAIL RPQSYSSQLK TAFFHSTPVL ERKRRTSWES KANVHKKRFR RMREKQELLR  60
   61 NVNAFAANMF TSWHDEFDDD GPSSRKQTSW FKKQYSKEPK GNQNNKHGPY TWGKRNFDFC 120
  121 EVDEDFDVDY VFRTAFGGSR GFSFSFTHEE DEPRWRHHSS RFSNNSNRSW RSKYRLDEDE 180
  181 EEEDYTSDSS DSESE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNQVSHRQAL GLSPSGPLNL KDVKHAYRTC ALKWHPDRHQ GSTKEAAEAK FKLCSVAYQS  60
   61 LCEKLSVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.0
Match: 2ctwA
Description: Solution structure of J-domain from mouse DnaJ subfamily C menber 5
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle