| Protein: | PME35_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 529 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME35_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
518.0 | [0..6] | [528..10] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MATTSFSLPN HKFGIKLMLF LVLNLLSLQT SVFAHSSNSK FTKISRHPNS DSSSRTKPST 60
61 SSNKGFLSSV QLSLDHALFA RSLAFNLTLS HRTSQTLMLD PVNDCLELLD DTLDMLYRIV 120
121 VIKRKDHVND DVHTWLSAAL TNQETCKQSL SEKSSFNKEG IAIDSFARNL TGLLTNSLDM 180
181 FVSDKQKSSS SSNLTGGRKL LSDHDFP
|
| Detection Method: |  |
| Confidence: | 21.39794 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [208-529] |
1 11 21 31 41 51
| | | | | |
1 TWVSSSDRKL LEASVEELRP HAVVAADGSG THMSVAEALA SLEKGSGRSV IHLTAGTYKE 60
61 NLNIPSKQKN VMLVGDGKGK TVIVGSRSNR GGWNTYQSAT VAAMGDGFIA RDITFVNSAG 120
121 PNSEQAVALR VGSDRSVVYR CSIDGYQDSL YTLSKRQFYR ETDITGTVDF IFGNSAVVFQ 180
181 SCNLVSRKGS SDQNYVTAQG RSDPNQNTGI SIHNCRITGS TKTYLGRPWK QYSRTVVMQS 240
241 FIDGSIHPSG WSPWSSNFAL KTLYYGEFGN SGPGSSVSGR VSWAGYHPAL TLTEAQGFTV 300
301 SGFIDGNSWL PSTGVVFDSG LL
|
| Detection Method: | |
| Confidence: | 97.69897 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
