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View Structure Prediction Details

Protein: DTX30_ARATH
Organism: Arabidopsis thaliana
Length: 498 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DTX30_ARATH.

Description E-value Query
Range
Subject
Range
gi|113548993, gi... - gi|115453843|ref|NP_001050522.1| Os03g0571900 [Oryza sativa (japonica cultivar-group)], gi|113548993...
320.0 [0..24] [492..624]

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Predicted Domain #1
Region A:
Residues: [1-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEDKILTET LLSAAEEPPA LPFSSVEDIP PITTVGGFVK EFNVEVKKLW YLAGPAIFMS  60
   61 ITQYSLGAAT QVFAGHISTI ALAAVSVENS VIAGFSFGVM LGMGSALETL CGQAFGAGKL 120
  121 SMLGVYLQRS WVILNVTAVI LSLLYIFAAP ILAFIGQTPA ISSATGIFSI YMIPQIFAYA 180
  181 VNYPTAKFLQ SQSKIMVMAA ISAVALVLHV LLTWFVIEGL QWGTAGLAVV LNASWWFIVV 240
  241 AQLVYIFSG

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.958607
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [250-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TCGEAWSGFS WEAFHNLWSF VRLSLASAVM LCLEVWYLMA VILFAGYLKN AEISVAALSI  60
   61 CMNILGWTAM IAIGMNAAVS VRVSNELGAK HPRTAKFSLL VAVITSTVIG LAISIALLIF 120
  121 RDKYPSLFVG DEEVIIVVKD LTPILAVSIV INNVQPVLSG VAVGAGWQAV VAYVNIVCYY 180
  181 VFGIPFGLLL GYKLNFGVMG IWCGMLTGTV VQTIVLTWMI CRTNWDTEAA MAEGRIREWG 240
  241 GEVSDQLLN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 46.853872
Match: PF01554.9
Description: No description for PF01554.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle