YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|21536836, gi|...
Organism: Arabidopsis thaliana
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21536836, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
395.0 [0..3] [331..1164]

Back

Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAPLVCHGH SRPVVDVAYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW  60
   61 SCSLDKNAIR AASASADFTA KIWNALTGDE LHSFEHKHIV RACAFSEDTH RLLTGGMEKI 120
  121 LRIFDLNRPD APPKEVGNSP GSIRTVEWLH SDNTILSSCT DTGDIRLWDI RSDKIVHTLE 180
  181 TKSPVTSAEV SQDGRYITTA DGSSVKFWDA KNFGLLKSYD MPCNVESASL EPKHGNTFIA 240
  241 GGEDMWVHRF DFQTGEEIGC NKGHHGPVHC VRYAPGGESY TSGSEDGTVR IWVVGSVNHP 300
  301 EESNLSGHVK LVAEEVVRKA ESLRISEKAA EAK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.30103
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle