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View Structure Prediction Details

Protein: gi|15242883, gi|...
Organism: Arabidopsis thaliana
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242883, gi|....

Description E-value Query
Range
Subject
Range
gi|67921998, gi|... - gi|67921998|ref|ZP_00515514.1| Non-ribosomal peptide synthase:Amino acid adenylation [Crocosphaera w...
366.0 [0..3] [441..1101]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIRVKQATI VKPAEETPTH NLWLSNLDLI QVRLHMGTLY FYKPCSSSDR PNTQSLIEAL  60
   61 SKVLVFFYPA AGRLQKNTNG RLEVQCNGEG VLFVEAESDS TVQDIGLLTQ SLDLSQLVPT 120
  121 VDYAGDISSY PLLLFQVTYF KCGTICVGSS IHHTFGEATS LGYIMEAWSL TARGLLVKLT 180
  181 PFLDRTVLHA RNPPSSVFPH TEYQSPPFHN HPMKSLAYRS NPESDSAIAT LKLTRLQLKA 240
  241 LKARAEIADS KFSTYEVLVA HTWRCASFAN EDLSEEHSTR LHIIIDGRPR LQPKLPQGYI 300
  301 GNTLFHARPV SPLGAFHRES FSETVERVHR EIRKMDNEYL RSAIDYLERH PDLDQLVPGE 360
  361 GNTIFSCAAN FCIVSLIKQT AYEMDFGWGK AYYKRASHLN EGKGFVTGNP DEEGSMMLTM 420
  421 CLKKTQLSKF RKLFYEFLNV SAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle