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View Structure Prediction Details

Protein: TPPF_ARATH
Organism: Arabidopsis thaliana
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPPF_ARATH.

Description E-value Query
Range
Subject
Range
TPPG_ARATH - Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana GN=TPPG PE=2 SV=1
252.0 [0..1] [368..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNSNHKSS VLKDPSPSVN QSRLGVSSRF MMSQWKKPAK LDDVRSNGWL DAMISSSPPR  60
   61 KKLVKDFNVE VAPEDDFAQR AWMVKYPSAI SSFAHIAAQA KK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.154902
Match: 1uqtA
Description: Trehalose-6-phosphate from E. coli bound with UDP-2-fluoro glucose.
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [103-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKIAVFLDYD GTLSPIVDDP DRAIMSDAMR SAVKDVASYF PTAIISGRSR DKVYQLVGLT  60
   61 ELYYAGSHGM DIMTSSDGPN CFKSTDQQGK EVNLFQPARE FIPVIDEVFR TLVEKMKDIK 120
  121 GAKVENHKFC ASVHYRNVDE KDWPIIAQRV HDHLKQYPRL RLTHGRKVLE VRPVIDWNKG 180
  181 RAVEFLLESL GLSNKDDLLP IYIGDDTTDE DAFKVLRDGN RGFGILVSSI PKESNAFYSL 240
  241 RDPSEVKKFL KTLVKWAKLE KNSTGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.221849
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.92340854382984 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle