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View Structure Prediction Details

Protein: NAT2_ARATH
Organism: Arabidopsis thaliana
Length: 524 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|49333379 - gi|49333379|gb|AAT64019.1| putative permease [Gossypium hirsutum]
319.0 [0..1] [524..1]

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Predicted Domain #1
Region A:
Residues: [1-184]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVKPEEIS HPPMDQLQGL EYCIDSNPPW GEAIALGFEH YILALGTAVM IPSILVPMMG  60
   61 GDDGDKVRVV QTLLFLQGVN TLLQTLFGTR LPTVIGGSYA FMVPIISIIH DSSLTRIEDP 120
  121 QLRFLSTMRA VQGAIIVASS VQIILGFSQM WAICSRFFSP IGMVPVIALT GFGLFNRGFP 180
  181 VVGN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [185-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CVEIGLPMLI LFVIFSQYLK NFQFRQFPVV ERFALIIALI IVWAYAHVLT ASGAYKHRPH  60
   61 QTQLNCRTDM SNLISSAPWI KIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [268-524]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPLQWGAPSF DAGHAFAMMA AVLVSLIEST GAFKAAARLA SATPPPPHVL SRGIGWQGIG  60
   61 ILLNGLFGTL SGSSVSVENI GLLGSTRVGS RRVIQISAGF MIFFSMLGKF GALFASIPFT 120
  121 IFAAVYCVLF GLVASVGLSF LQFTNMNSLR NLFIVGVSLF LGLSIPEYFR DFSMKALHGP 180
  181 AHTNAGWFND FLNTIFLSSP MVALMVAVFL DNTLDYKETA RDRGLPWWAK FRTFKGDSRN 240
  241 EEFYTLPFNL NRFFPPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle