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View Structure Prediction Details

Protein: MAP1B_ARATH
Organism: Arabidopsis thaliana
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MAP1B_ARATH.

Description E-value Query
Range
Subject
Range
MAP1_CHICK - Methionine aminopeptidase 1 OS=Gallus gallus GN=METAP1 PE=2 SV=1
349.0 [0..5] [368..9]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSVFLSSF SSSSSLQLCS SFHGEYLAPS RCFLGAPVTS SSLSLSGKKN SYSPRQFHVS  60
   61 AKKVSGLEEA IRIRKMRELE TKSKVRRNPP LRRGRVSPRL LVPDHIPRPP YVESGVLPDI 120
  121 SSEFQIPGPE GIAKMRAACE LAARVLNYAG TLVKPSVTTN EIDKAVHDMI IEAGAYPSPL 180
  181 GYGGFPKSVC TSVNECMCHG IPDSRQLQSG DIINIDVTVY LDGYHGDTSR TFFCGEVDEG 240
  241 FKRLVKVTEE CLERGIAVCK DGASFKKIGK RISEHAEKFG YNVVERFVGH GVGPVFHSEP 300
  301 LIYHYRNDEP GLMVEGQTFT IEPILTIGTT ECVTWPDNWT TLTADGGVAA QFEHTILITR 360
  361 TGSEILTKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.522879
Match: 2g6pA
Description: No description for 2g6pA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle