| Protein: | EF104_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 241 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF104_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
239.0 | [0..1] | [241..1] |
|
|
197.0 | [0..30] | [239..2] |
|
|
194.0 | [0..30] | [239..2] |
|
|
192.0 | [0..38] | [239..1] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MATKQEALAI DFISQHLLTD FVSMETDHPS LFTNQLHNFH SETGPRTITN QSPKPNSTLN 60
61 QRKPPLPNLS VSRTVST
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.561 | a.7.14 | Description not found. |
| View | Download | 0.518 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.507 | a.60.14 | Description not found. |
| View | Download | 0.446 | a.74.1 | Cyclin-like |
| View | Download | 0.446 | a.74.1 | Cyclin-like |
| View | Download | 0.433 | a.39.1 | EF-hand |
| View | Download | 0.395 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.304 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.304 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.297 | a.64.1 | Saposin |
|
Region A: Residues: [78-148] |
1 11 21 31 41 51
| | | | | |
1 KTEKEEEERH YRGVRRRPWG KYAAEIRDPN KKGCRIWLGT YDTAVEAGRA YDQAAFQLRG 60
61 RKAILNFPLD V
|
| Detection Method: | |
| Confidence: | 24.69897 |
| Match: | 1gccA |
| Description: | GCC-box binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-241] |
1 11 21 31 41 51
| | | | | |
1 RVTSETCSGE GVIGLGKRKR DKGSPPEEEK AARVKVEEEE SNTSETTEAE VEPVVPLTPS 60
61 SWMGFWDVGA GDGIFSIPPL SPTSPNFSVI SVT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.253 | a.28.1 | ACP-like |
| View | Download | 0.253 | a.28.1 | ACP-like |
