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View Structure Prediction Details

Protein: RGXT2_ARATH
Organism: Arabidopsis thaliana
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RGXT2_ARATH.

Description E-value Query
Range
Subject
Range
MGP4_ARATH - UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 OS=Arabidopsis thaliana GN=MGP4 PE=2 SV=1
341.0 [0..1] [367..1]

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Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKQQTLHQ QRPFSSSPRS YSSISNRPIF LLSRNGLLLV LLALFLLLGV FLPWPGSPLL  60
   61 LFPNKVSSPS YASSLSPHAK SEWRNYTLAQ AAKFVATNGT VIVCAVSSPF LPFLNNWLIS 120
  121 VSRQKHQEKV LVIAEDYITL YKVNEKWPGH AVLIPPALDS KTAYSFGSQG FFNFTARRPQ 180
  181 HLLQILELGY NVMYNDVDMV WLQDPFQYLE GSHDAYFTDD MPQIKPLNHS HDLPAPDQNG 240
  241 ETYICSCMIY LRPTNGAKLL MKKWSEELQS QAWSESIRFK ANDQPAFNLA LNKTAHQVDL 300
  301 YLLSQVAFPT GGLYFNDAAW VKETKGKHVI VHNNYIIGYD RKMRRFQDYG LWLVDDHALE 360
  361 SPLGKLQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.31
Match: 1zcuA
Description: apo form of the 162S mutant of glycogenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.2097350467072 bayes_pls_golite062009
transferase activity 0.75347715535193 bayes_pls_golite062009

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