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View Structure Prediction Details

Protein: gi|7488404, gi|7...
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7488404, gi|7....

Description E-value Query
Range
Subject
Range
gi|48895332, gi|... - gi|71675283|ref|ZP_00673028.1| Aminotransferase, class I and II [Trichodesmium erythraeum IMS101], g...
277.0 [0..35] [388..4]

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Predicted Domain #1
Region A:
Residues: [1-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHNSNLVLP SHQTETQTQD ETDISVWRFR GSDNAAKASS VTMRVIVYKL FDECSLDVKK  60
   61 PLLPLAHGDP SVYPCYRTSI LVENAVVDVL RSGKGNSYGP AAGILPARQA VADYVNRDLT 120
  121 NKVKPNDVFI TVGCNQGIEV VLQSLARPNA NILLPRPSYP HYEARAVYSG LEVRKFDLLP 180
  181 EKEWEIDLPG IEAMADENTV AMVIINPNNP CGNVYSYDHL KKVAETAKKL GIMVITDEVY 240
  241 CQTIFGDKPF VPMGEFSSIT PVITLGGISK GWIVPGWRIG WIALNDPRGI LKSTGMVQSI 300
  301 QQNLDITPDA TTIVQAALPE ILGKANKELF AKKNSMLKQN VELVCDRLKE IPCLVCNKKP 360
  361 ESCTYLLVPP PTSLILFHDS RSIWMILIS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 1xi9A
Description: Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76873005093488 bayes_pls_golite062009
transferase activity 0.3093369052482 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle