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View Structure Prediction Details

Protein: ACR8_ARATH
Organism: Arabidopsis thaliana
Length: 441 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR8_ARATH.

Description E-value Query
Range
Subject
Range
ACR4_ARATH - ACT domain-containing protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=2 SV=1
351.0 [0..9] [441..10]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKGYLDEY EKLVIRMNTP RVVIDNGVCS SATIVKVDSS RRNGILLEAV QILTDLNLSI  60
   61 KKAYISSDGT WNMDVFHVTD LNGNKLNDQS VLRYIEQSIE TVYYGENIEV NGLTALELTG 120
  121 TDRIGLLSEM FAVLSDLNCD VVDAKLWTHN GRVASVIYLK DCISGAPILD SHRISKIEGR 180
  181 LKNVLNGDND VNSAAKTCVT VDSMM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.09691
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.115197515122073 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [206-441]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HIERRLHQLM FEDRDYERRS KKHERSPMVV VTVQNWAERG YSVVNVHCRD RTKLLFDVVC  60
   61 TLTDMEYAVF HATINTAEDQ AHLEFYIRHK DGSPISSEAE RQRVIQCLEA AVERRALEGV 120
  121 RLELRHPDKQ GLLAEVTRTF RENGLNVTRT EISTSSDMAT NIFYVTDANG DEPDFKLIES 180
  181 VREKIGLECL RVKEMPTMYH KKGDGEEQQQ TKAVLVSLGS LVWRNLFNFG LIKSCS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.221849
Match: 2re1A
Description: No description for 2re1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle