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View Structure Prediction Details

Protein: ACR1_ARATH
Organism: Arabidopsis thaliana
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|42572033 - gi|42572033|ref|NP_974107.1| ACR4 (ACT REPEAT 4); amino acid binding [Arabidopsis thaliana]
325.0 [0..2] [476..3]
gi|92890833 - gi|92890833|gb|ABE90521.1| ACT domain, putative [Medicago truncatula]
308.0 [0..10] [476..1]
gi|28875985, gi|... - gi|34896992|ref|NP_909842.1| putative ACT domain repeat protein [Oryza sativa (japonica cultivar-gro...
303.0 [0..2] [475..3]

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Predicted Domain #1
Region A:
Residues: [1-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMEIAYQPRI DSEIESLVER INPPRVCVDN DSDPECTLIK VDSANKYGIL LDMVQVLADL  60
   61 DLVISKCYIS SDGEWFMDVF HVTDQLGNKL TDRSLILYIQ QAICSSRTGG ITKEMQSNLK 120
  121 REVQQRHVST EHTAFEITGI NRPGLLSEIS AVLSDIGCHV TAAVAWTHHE RAAMVIYLED 180
  181 GFNGGPIIDP IRKAQVKDHL DTVMEAHH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.522879
Match: 2nyiA
Description: No description for 2nyiA was found.

Predicted Domain #2
Region A:
Residues: [209-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVGDVSHVVV RVVEAKGVPV GWAHTERRLH ELMYGEGDYE NCFDCDCFGD RCDALWRGRC  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERIHVTIEAC NGYSMVNVKC RDRPKLLFDT VCALKELQFV VFHAVAGAKG STAEQEYFIR  60
   61 KKNGGTLETE GQRERLRHCL VAAISRRASQ GLKLEIRTEN KMGLLSDVTR VVRENGLSIT 120
  121 RAEMCTQGEI AVGSFYVTDV NGGETGPSEV EAVVRELGGA VVSAVKGVGM MPRRIGSTSD 180
  181 SVEQDKAKSS IGRMFWSKLE RLSTSIRSL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.154902
Match: 1u8sA
Description: Crystal structure of putative glycine cleavage system transcriptional repressor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle