| Protein: | RAV2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 352 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAV2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
240.0 | [0..1] | [352..1] |
|
|
192.0 | [0..1] | [351..1] |
|
|
187.0 | [0..95] | [351..56] |
|
Region A: Residues: [1-177] |
1 11 21 31 41 51
| | | | | |
1 MDSSCIDEIS SSTSESFSAT TAKKLSPPPA AALRLYRMGS GGSSVVLDPE NGLETESRKL 60
61 PSSKYKGVVP QPNGRWGAQI YEKHQRVWLG TFNEQEEAAR SYDIAACRFR GRDAVVNFKN 120
121 VLEDGDLAFL EAHSKAEIVD MLRKHTYADE LEQNNKRQLF LSVDANGKRN GSSTTQN
|
| Detection Method: |  |
| Confidence: | 11.69897 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [178-291] |
1 11 21 31 41 51
| | | | | |
1 DKVLKTREVL FEKAVTPSDV GKLNRLVIPK QHAEKHFPLP SPSPAVTKGV LINFEDVNGK 60
61 VWRFRYSYWN SSQSYVLTKG WSRFVKEKNL RAGDVVTFER STGLERQLYI DWKV
|
| Detection Method: | |
| Confidence: | 22.09691 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [292-352] |
1 11 21 31 41 51
| | | | | |
1 RSGPRENPVQ VVVRLFGVDI FNVTTVKPND VVAVCGGKRS RDVDDMFALR CSKKQAIINA 60
61 L
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.852 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.851 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.783 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.783 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.777 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.756 | N/A | N/A | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.754 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.754 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.734 | N/A | N/A | d.58.17 | Metal-binding domain |
