| Protein: | Y3885_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3885_ARATH.
| Description | E-value | Query Range |
Subject Range |
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292.0 | [0..1] | [428..1] |
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269.0 | [0..1] | [427..1] |
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218.0 | [0..1] | [426..90] |
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209.0 | [0..50] | [426..91] |
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193.0 | [0..2] | [426..343] |
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189.0 | [0..1] | [426..1] |
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Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MGCASSKHRK RCLHCRRGYS PPVDVQRSHS VHHASQNSED SCHMVALSSS SLGSLKLCDS 60
61 SFGHNHKHLA DFSEKLVSGE SVKTGNGFGP NVVREKSDKE KSNLELQAKL MEAKVWSSMM 120
121 NEKIPKIVPK TPIV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.393 | b.40.4 | Nucleic acid-binding proteins |
| View | Download | 0.390 | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.380 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.380 | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.356 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.356 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.355 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.353 | d.73.1 | RuBisCO, small subunit |
| View | Download | 0.347 | c.57.1 | Molybdenum cofactor biosynthesis proteins |
| View | Download | 0.330 | b.40.4 | Nucleic acid-binding proteins |
|
Region A: Residues: [135-354] |
1 11 21 31 41 51
| | | | | |
1 TPPGEPETIN TWEMMDGLED VLSPLRSPNH VKSFSFDVGP NGGKSNGSVK PVWLQMEEEE 60
61 EGFEDFDPEI ISSFRKSLQE LPSDHPFHIS NHDFELKPRF NFSDEEKEEE EQSVGKERVI 120
121 LYFTSLRGIR KTYEESCDVR VILKSLGIRV DERDVSMHSG FKDELKELLG EKFNKGVGIT 180
181 LPRVFLGRKY IGGAEEIRKL NEDGKLEKLL GGCERVEENQ
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| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1nm3A |
| Description: | C-terminal, Grx domain of Hybrid-Prx5; N-terminal, Prx domain of Hybrid-Prx5 |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [355-428] |
1 11 21 31 41 51
| | | | | |
1 NGNGLECEAC GDVRFVPCET CSGSCKVYYE YEDDDDDDDE GDDDESVKEE REYGFQTCPD 60
61 CNENGLIRCP VCCD
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| Detection Method: | |
| Confidence: | 1.14 |
| Match: | 1m1pA |
| Description: | Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain |
Matching Structure (courtesy of the PDB): |
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