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View Structure Prediction Details

Protein: gi|8843729, gi|1...
Organism: Arabidopsis thaliana
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|8843729, gi|1....

Description E-value Query
Range
Subject
Range
gi|76611545 - gi|76611545|ref|XP_886238.1| PREDICTED: similar to ephrin receptor EphB2 isoform 2 precursor isoform...
314.0 [0..2] [402..544]

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Predicted Domain #1
Region A:
Residues: [1-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPRGYQRAP SMQKPTDYPT DKTLHPNYPF LMSSHGLKSF ESDDEDDDSD SSNDQFAFTI  60
   61 NTELLVDVKD ISIGDFIGEG SSSTVYRGLF RRVVPVSVKI FQPKRTSALS IEQRKKFQRE 120
  121 VLLLSKFRHE NIVRFIGACI EPKLMIITEL MEGNTLQKFM LSVRPKPLDL KLSISFALDI 180
  181 ARGMEFLNAN GIIHRDLKPS NMLLTGDQKH VKLADFGLAR EETKGFMTFE AGTYRWMAPE 240
  241 LFSYDTLEIG EKKHYDHKVD VYSFAIVFWE LLTNKTPFKG KNNIFVAYAA SKNQRPSVEN 300
  301 LPEGVVSILQ SCWAENPDAR PEFKEITYSL TNLLRSLSSD TDATSSNSKA NIATEDSTSS 360
  361 LVQERVVCDC PGLKMSKTKK LKKKTNKLMN MIVPFLKIFK SCMSK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 74.0
Match: 2qoqA
Description: No description for 2qoqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle