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View Structure Prediction Details

Protein: gi|11260411, gi|...
Organism: Arabidopsis thaliana
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11260411, gi|....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
730.0 [0..1] [509..87]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMLLGGQAT NGALRSKTKI ICTLGPVSRS VEMIEKLLKA GMNVARFNFS HGSHSYHQET  60
   61 LDNLRTAMDN TGILSAVMLD TKGPEIRTGF LKEGKPIQLN QGQEITISID YMIEGDSNVI 120
  121 SMSYKKLAED VKPGDVILCS DGTISLTVLS CDKSFGLVRC RCENSAILGE RKNVNLPGIV 180
  181 VDLPTLTEKD KEDIIQWGVP NKIDIIALSF VRKGSDLTEV RRLLGEHSKN IMLMSKVENQ 240
  241 EGVMNCEKIL ENSDAFMVAR GDLGMEIPIE KMFLAQKTMI KMANALGKPV VTATQMLESM 300
  301 TVSPRPTRAE ATDVANAVLD GTDCVMLSGE TAAGAHPEAA VLTMSRICKE AEDFIDYDIL 360
  361 HKKTLGMVSL PLSPIESLAA SVVSTAQSVF ASAIVVLTKG GYTAELVAKY RPSVPILSVI 420
  421 VPEIAQGNDM EMSCSDSVAH AARRGLIYRR IIPVVATGSS ARDSNKDATE EMINLAIGFA 480
  481 KTKGICKNGD SIVALHKIDG SSVVKIVTVE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle