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View Structure Prediction Details

Protein: GDL81_ARATH
Organism: Arabidopsis thaliana
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL81_ARATH.

Description E-value Query
Range
Subject
Range
gi|116309680 - gi|116309680|emb|CAH66728.1| H0404F02.4 [Oryza sativa (indica cultivar-group)]
313.0 [0..2] [368..9]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTQDETIFV LHDQQSNNSA AQSFTNFIFG DSLVDVGNNN YIFTLSKADS SPYGIDFAPS  60
   61 NGQPTGRFTN GRTISDIVGE ALGAKSPPPP YLEPNTEANT IRNGINYASG AAGILDDTGL 120
  121 LFIGRVPLRE QVSNFEKSRE YMVRVIGENG TKEMLKNAMF TITIGSNDIL NYIQPSIPFF 180
  181 SQDKLPTDVL QDSMVLHLTT HLKRLHQLGG RKFVVVGVGP LGCIPFARAL NLIPAGKCSE 240
  241 QVNQVVRGYN MKLIHSLKTL NNELRSEDYN TTFVYANSYD LFLKLVLNYQ LFGLKNADKP 300
  301 CCGGYFPPFA CFKGPNQNSS QAACEDRSKF VFWDAYHPTE AANLIVAKAL LDGDQTVATP 360
  361 FNIRYLNDL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.34
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle