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View Structure Prediction Details

Protein: gi|51972116, gi|...
Organism: Arabidopsis thaliana
Length: 175 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51972116, gi|....

Description E-value Query
Range
Subject
Range
gi|26451059, gi|... - gi|28372934|gb|AAO39949.1| At5g50030 [Arabidopsis thaliana], gi|26451059|dbj|BAC42634.1| unknown pro...
248.0 [0..1] [161..1]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSYGFGV VYLAVLLPCL LVPASATKYI DAICHLVSDK AFCTKTLNAY PPATSATSTF  60
   61 EAAVATLHLG VSYANNAAGF AGEAAKENPQ LKEKFDACQL ELALISRGLK NASEELYDDT 120
  121 AYFDVTDCLD NIATMKNLVG KNTDKASKTI ITMTLMLENF IFLAIGATST IDIKT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.74
Match: 1x91A
Description: Crystal structure of mutant form A of a pectin methylesterase inhibitor from Arabidopsis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle