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View Structure Prediction Details

Protein: GLO2N_ARATH
Organism: Arabidopsis thaliana
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLO2N_ARATH.

Description E-value Query
Range
Subject
Range
gi|30684920 - gi|30684920|ref|NP_850166.1| GLX2-5 (GLYOXALASE 2-5); hydroxyacylglutathione hydrolase/ iron ion bin...
325.0 [0..1] [324..1]

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Predicted Domain #1
Region A:
Residues: [1-68]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTISKASSA TSFFRCSRKL SSQPCVRQLN IRKSLVCRVM KLVSSPLRTL RGAGKSIRVS  60
   61 KFCSVSNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 1smlA
Description: Zn metallo-beta-lactamase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [69-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSLQIELVPC LKDNYAYILH DEDTGTVGVV DPSEAEPIID SLKRSGRNLT YILNTHHHYD  60
   61 HTGGNLELKD RYGAKVIGSA MDKDRIPGID MALKDGDKWM FAGHEVHVMD TPGHTKGHIS 120
  121 LYFPGSRAIF TGDTMFSLSC GKLFEGTPKQ MLASLQKITS LPDDTSIYCG HEYTLSNSKF 180
  181 ALSLEPNNEV LQSYAAHVAE LRSKKLPTIP TTVKMEKACN PFLRSSNTDI RRALRIPEAA 240
  241 DEAEALGIIR KAKDDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.69897
Match: 1xm8A
Description: X-RAY STRUCTURE OF GLYOXALASE II FROM ARABIDOPSIS THALIANA GENE AT2G31350
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydroxyacylglutathione hydrolase activity 3.53012507604564 bayes_pls_golite062009
catalytic activity 0.941400907161877 bayes_pls_golite062009
binding 0.900972948435178 bayes_pls_golite062009
thiolester hydrolase activity 0.802604883362264 bayes_pls_golite062009
hydrolase activity 0.021392930321391 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle