| Protein: | PTR26_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 545 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR26_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
302.0 | [0..20] | [544..2] |
|
Region A: Residues: [1-545] |
1 11 21 31 41 51
| | | | | |
1 MASIDEERSL LEVEESLIQE EVKLYAEDGS IDIHGNPPLK QTTGNWKACP FIFANECCER 60
61 LAYYGIAKNL ITYFTNELHE TNVSAARHVM TWQGTCYITP LIGALIADAY WGRYWTIACF 120
121 SAIYFTGMVA LTLSASVPGL KPAECIGSLC PPATMVQSTV LFSGLYLIAL GTGGIKPCVS 180
181 SFGADQFDKT DPSERVRKAS FFNWFYFTIN IGAFVSSTVL VWIQENYGWE LGFLIPTVFM 240
241 GLATMSFFFG TPLYRFQKPR GSPITSVCQV LVAAYRKSNL KVPEDSTDEG DANTNPWKLC 300
301 TVTQVEEVKI LLRLVPIWAS GIIFSVLHSQ IYTLFVQQGR CMKRTIGLFE IPPATLGMFD 360
361 TASVLISVPI YDRVIVPLVR RFTGLAKGFT ELQRMGIGLF VSVLSLTFAA IVETVRLQLA 420
421 RDLDLVESGD IVPLNIFWQI PQYFLMGTAG VFFFVGRIEF FYEQSPDSMR SLCSAWALLT 480
481 TTLGNYLSSL IITLVAYLSG KDCWIPSDNI NNGHLDYFFW LLVSLGSVNI PVFVFFSVKY 540
541 THMKV
|
| Detection Method: |  |
| Confidence: | 9.39794 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.26757615356623 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
