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View Structure Prediction Details

Protein: LACS5_ARATH
Organism: Arabidopsis thaliana
Length: 666 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS5_ARATH.

Description E-value Query
Range
Subject
Range
LACS4_ARATH - Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana GN=LACS4 PE=2 SV=1
577.0 [0..1] [664..1]

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Predicted Domain #1
Region A:
Residues: [1-666]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQKRFIFE VEAAKEATDG NPSVGPVYRS TFAQNGFPNP IDGIQSCWDI FRTAVEKYPN  60
   61 NRMLGRREIS NGKAGKYVWK TYKEVYDIVI KLGNSLRSCG IKEGEKCGIY GINCCEWIIS 120
  121 MEACNAHGLY CVPLYDTLGA GAVEFIISHA EVSIAFVEEK KIPELFKTCP NSTKYMKTVV 180
  181 SFGGVKPEQK EEAEKLGLVI HSWDEFLKLG EGKQYELPIK KPSDICTIMY TSGTTGDPKG 240
  241 VMISNESIVT ITTGVMHFLG NVNASLSEKD VYISYLPLAH VFDRAIEECI IQVGGSIGFW 300
  301 RGDVKLLIED LGELKPSIFC AVPRVLDRVY TGLQQKLSGG GFFKKKVFDV AFSYKFGNMK 360
  361 KGQSHVAASP FCDKLVFNKV KQGLGGNVRI ILSGAAPLAS HIESFLRVVA CCNVLQGYGL 420
  421 TESCAGTFAT FPDELDMLGT VGPPVPNVDI RLESVPEMNY DALGSTPRGE ICIRGKTLFS 480
  481 GYYKREDLTK EVFIDGWLHT GDVGEWQPNG SMKIIDRKKN IFKLAQGEYV AVENLENVYS 540
  541 QVEVIESIWV YGNSFESFLV AIANPAQQTL ERWAVENGVN GDFNSICQNA KAKAFILGEL 600
  601 VKTAKENKLK GFEIIKDVHL EPVAFDMERD LLTPTYKKKR PQLLKYYQNV IHEMYKTTKE 660
  661 SLASGQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 121.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle