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View Structure Prediction Details

Protein: gi|18397766, gi|...
Organism: Arabidopsis thaliana
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18397766, gi|....

Description E-value Query
Range
Subject
Range
gi|109103934 - gi|109103934|ref|XP_001103333.1| PREDICTED: similar to unc-50 homolog [Macaca mulatta]
319.0 [0..1] [247..1]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPTTSRSRS SSSSSRANPM FLQYFRRIVK WQQMDVEYTF WQMLNLCTSP KVVYQHTKYH  60
   61 KQTKNQWARD DPAFIVICSL LLVVATVAYC VTYDHSSSHA VVVVVSVLFT HFLITGAVIA 120
  121 TCCWFLTNSY LREETPNSHV VEQRVEWLYT FDVHCNSFFP MFVLLYVVHY FLSPLLIAHG 180
  181 FIPLLLSNLL FMVGASYYHY LNFLGYDVLP FLERTTFFLY PIGVVIVLSP ILILSGFNPS 240
  241 RYFMNMYFSQ RL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle