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View Structure Prediction Details

Protein: gi|15240609, gi|...
Organism: Arabidopsis thaliana
Length: 183 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240609, gi|....

Description E-value Query
Range
Subject
Range
gi|12322154, gi|... - gi|9857522|gb|AAG00877.1|AC064840_8 Hypothetical protein [Arabidopsis thaliana], pir||C96591 hypothe...
257.0 [0..9] [183..8]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSSHCFLI VSVALLLQVL LSPVSALTLT STKYINKLCQ MSFVDNKPFC LQTLSAYPPA  60
   61 ASATGLLPLA SAVIRGIVLP QAKKSASFAN GAAKKEPSLK TQFQTCQEAF VSIGDSLMSA 120
  121 FEELKRDPHI ATYDVMTCTD HTTQVKNLVG KNTDVASKTL IEMTMQMEKL IPLALASTQV 180
  181 LGG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.64
Match: 1x91A
Description: Crystal structure of mutant form A of a pectin methylesterase inhibitor from Arabidopsis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle