| Protein: | gi|20465879, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 676 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20465879, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
409.0 | [0..2] | [653..6] |
|
Region A: Residues: [1-382] |
1 11 21 31 41 51
| | | | | |
1 MSREKQGKRS GSNGTEKVLV AVKASREISK TAFVWALTHI VHPGDCITLI VVVTSYNAGR 60
61 KLWTFPRFAG DCATGHWKLH SDPMSEIKSD LTDTCSQMIL QLHDVYDPNK VNVRIKIVSG 120
121 SPCGAVAAEA KKSQANWVVL DKHLKHEEKR CIDELQCNIV AMKRSEAKVL RLNLVGSSTK 180
181 EPELASEKNK NRLLDSVKAV VTTTPMSSPE VETSFTGTEA WTSSVSSSDL GTSSPVFTAE 240
241 VRKDETLVVK ENESDSDSES ENLSLPSLSK RFQPWISEYL STHCVSMQES TRGDDKAVQV 300
301 STKKALLEKI SKLDEGEEAA MSSKRKDLEE YSGTLRALSR NAPPVSPPLC SICQHKAPVF 360
361 GKPPRFFSYK ELELATNGFS RA
|
| Detection Method: |  |
| Confidence: | 5.522879 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-676] |
1 11 21 31 41 51
| | | | | |
1 NFLAEGGFGS VHRGVLPEGQ IVAVKQHKVA STQGDVEFCS EVEVLSCAQH RNVVMLIGFC 60
61 IEDTRRLLVY EYICNGSLDS HLYGRHKDTL GWPARQKIAV GAARGLRYLH EECRVGCIVH 120
121 RDMRPNNILI THDYEPLVGD FGLARWQPDG ELGVDTRVIG TFGYLAPEYA QSGQITEKAD 180
181 VYSFGVVLIE LITGRKAMDI YRPKGQQCLT EWARSLLEEY AVEELVDPRL EKRYSETQVI 240
241 CMIHTASLCI RRDPHLRPRM SQVLRLLEGD MLMNEISGRF NGRLSTEKGL RDHN
|
| Detection Method: | |
| Confidence: | 71.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
