| Protein: | RBP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 360 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..3] | [360..188] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MDYDRYKLFV GGIAKETSEE ALKQYFSRYG AVLEAVVAKE KVTGKPRGFG FVRFANDCDV 60
61 VKALRDTHFI LGKPVDVRKA IRKHELYQQP FSMQFLERKV QQMNGGLREM SSNGVTSRTK 120
121 KIFVGGLSSN TTEEEFKSYF ERFGRTTDVV VMHDGVTNRP RGFGFVTYDS EDSVEVVMQS 180
181 NFHELSDKRV EVKRAIPKEG IQSNNGN
|
| Detection Method: |  |
| Confidence: | 42.522879 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [208-360] |
1 11 21 31 41 51
| | | | | |
1 AVNIPPSYSS FQATPYVPEQ NGYGMVLQFP PPVFGYHHNV QAVQYPYGYQ FTAQVANVSW 60
61 NNPIMQPTGF YCAPPHPTPP PTNNLGYIQY MNGFDLSGTN ISGYNPLAWP VTGDAAGALI 120
121 HQFVDLKLDV HSQAHQRMNG GNMGIPLQNG TYI
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
