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View Structure Prediction Details

Protein: AAPT1_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AAPT1_ARATH.

Description E-value Query
Range
Subject
Range
AAPT2_ARATH - Choline/ethanolaminephosphotransferase 2 OS=Arabidopsis thaliana GN=AAPT2 PE=1 SV=1
298.0 [0..1] [389..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYIGAHGVA ALHRYKYSGV DHSYLAKYVL QPFWTRFVKV FPLWMPPNMI TLMGFMFLVT  60
   61 SSLLGYIYSP QLDSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPRWVHFAHG LLLFLYQTFD AVDGKQARRT NSSSPLGELF DHGCDALACA FEAMAFGSTA  60
   61 MCGRDTFWFW VISAIPFYGA TWEHYFTNTL ILPVINGPTE GLALIFVSHF FTAIVGAEWW 120
  121 AQQLGQSIPL FSWVPFVN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 17.657577
Match: PF01066.12
Description: No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [214-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EIQTSRAVLY MMIAFAVIPT VAFNVTNVYK VVRSRNGSMV LALAMLYPFV VLLGGVLIWD  60
   61 YLSPINLIAT YPHLVVLGTG LAFGFLVGRM ILAHLCDEPK GLKTNMCMSL LYLPFALANA 120
  121 LTARLNAGVP LVDELWVLLG YCIFTVSLYL HFATSVIHEI TEALGIYCFR ITRKEA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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