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View Structure Prediction Details

Protein: gi|10764865, gi|...
Organism: Arabidopsis thaliana
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10764865, gi|....

Description E-value Query
Range
Subject
Range
gi|458224 - gi|458224|gb|AAB08487.1| putative copper efflux ATPase
168.0 [0..2] [229..238]

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Predicted Domain #1
Region A:
Residues: [1-204]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEEEKKEK GDEIITAVYK VHLHCRKCAC DIKKPLLRFQ GVQNVDFDLE KNEIKVKGKI  60
   61 EVVKIHKQIE KWSKKKVELI SPKPSEVKKT TTTTTTTSVV EKKTTEIKKD VIRTTVLKVH 120
  121 IHCAQCDKDL QHKLLKHKAI HIVKTDTKAQ TLTVQGTIES AKLLAYIKKK VHKHAEIISS 180
  181 KTEEEKKKEE EDKKKKEEED KKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 2ew9A
Description: No description for 2ew9A was found.

Predicted Domain #2
Region A:
Residues: [205-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDEKKKEEEK KKEEENKKKE GEKKKEEVKV EVTTKTITQV VEYKEIVKVE GQKDKDGNIP  60
   61 YFVHYVYAPQ LFSDENPNAC RIV

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.15
Match: 2d57A
Description: Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle