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View Structure Prediction Details

Protein: gi|10177356, gi|...
Organism: Arabidopsis thaliana
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177356, gi|....

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
126.0 [0..22] [218..1825]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQLLFLVLF VEGAIAFLLL IKIGPLRELV IKSLDQMKMG KGPATVKTIA GTMSVILFSN  60
   61 LMSIVKIQNK GAKLGTMSPM DQVLWRTHLL EASLLGVVLF LGFIIDRMHH YLRKLINLRS 120
  121 NVGSSKEELE QLQKERTELK EKEEKASKEI KQLQVKLSSI TERLKKAETE SKEKEKKLET 180
  181 AETHVTALQK QSAELLLEYD RLLEDNQHLQ SQILGKTKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.30103
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle