Protein: | TAF9_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 183 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF9_ARATH.
Description | E-value | Query Range |
Subject Range |
|
223.0 | [0..1] | [178..1] |
|
216.0 | [0..4] | [134..7] |
|
213.0 | [0..4] | [135..7] |
|
213.0 | [0..4] | [135..7] |
|
213.0 | [0..4] | [135..7] |
|
212.0 | [0..4] | [135..2] |
|
212.0 | [0..4] | [134..49] |
Region A: Residues: [1-81] |
1 11 21 31 41 51 | | | | | | 1 MAGEGEEDVP RDAKIVKSLL KSMGVEDYEP RVIHQFLELW YRYVVEVLTD AQVYSEHASK 60 61 PNIDCDDVKL AIQSKVNFSF S |
Detection Method: | ![]() |
Confidence: | 26.221849 |
Match: | 1tafA |
Description: | TAF(II)42 |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [82-183] |
1 11 21 31 41 51 | | | | | | 1 QPPPREVLLE LAASRNKIPL PKSIAGPGVP LPPEQDTLLS PNYQLVIPKK SVSTEPEETE 60 61 DDEEMTDPGQ SSQEQQQQQQ QTSDLPSQTP QRVSFPLSRR PK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.330 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
View | Download | 0.257 | a.4.1 | Homeodomain-like |
View | Download | 0.257 | a.4.1 | Homeodomain-like |
View | Download | 0.256 | c.5.1 | MurCD N-terminal domain |
View | Download | 0.251 | a.118.1 | ARM repeat |
View | Download | 0.250 | a.4.1 | Homeodomain-like |
View | Download | 0.230 | c.47.1 | Thioredoxin-like |
View | Download | 0.210 | d.58.14 | Ribosomal protein S6 |
View | Download | 0.200 | a.39.2 | Insect pheromon/odorant-binding proteins |