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View Structure Prediction Details

Protein: FD4L1_ARATH
Organism: Arabidopsis thaliana
Length: 295 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FD4L1_ARATH.

Description E-value Query
Range
Subject
Range
FAD4_ARATH - Fatty acid desaturase 4, chloroplastic OS=Arabidopsis thaliana GN=FAD4 PE=1 SV=1
445.0 [0..1] [288..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSFQTKNP LRPITNIPRS YGPTRVRVTC SVTTTNPQLN HENLVVEKRL VNPPLSKNND  60
   61 PTLQSTWTHR LWVAAGSTTI FASFAKSIIG GFGSHLWLQP ALACYAGYVF ADLGS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVYHWAIDNY GGASTPIVGA QLEASQGHHK YPWTITKRQF ANNSYTIARA ITFIVLPLNL  60
   61 AINNPLFHSF VSTFAFCILL SQQFHAWAHG TKSKLPPLVM ALQDMGLLVS RKDHPGHHQA 120
  121 PYNSNYCVVS GAWNKVLDES NLFKALEMAL FFQFGVRPNS WNEPNSDWTE ETETNFFTKI 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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