| Protein: | CSN5A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 358 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN5A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..1] | [358..1] |
|
|
337.0 | [0..3] | [356..8] |
|
|
320.0 | [0..1] | [339..1] |
|
|
319.0 | [0..1] | [339..1] |
|
|
319.0 | [0..1] | [342..1] |
|
|
319.0 | [0..1] | [341..1] |
|
Region A: Residues: [1-55] |
1 11 21 31 41 51
| | | | | |
1 MEGSSSTIAR KTWELENSIL TVDSPDSTSD NIFYYDDTSQ TRFQQEKPWE NDPHY
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.380 | N/A | N/A | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.378 | N/A | N/A | a.10.2 | Description not found. |
| View | Download | 0.365 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.328 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.318 | N/A | N/A | d.48.1 | RecA protein, C-terminal domain |
| View | Download | 0.298 | N/A | N/A | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.282 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.278 | N/A | N/A | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.268 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.238 | N/A | N/A | d.58.17 | Metal-binding domain |
|
Region A: Residues: [56-249] |
1 11 21 31 41 51
| | | | | |
1 FKRVKISALA LLKMVVHARS GGTIEIMGLM QGKTDGDTII VMDAFALPVE GTETRVNAQD 60
61 DAYEYMVEYS QTNKLAGRLE NVVGWYHSHP GYGCWLSGID VSTQRLNQQH QEPFLAVVID 120
121 PTRTVSAGKV EIGAFRTYSK GYKPPDEPVS EYQTIPLNKI EDFGVHCKQY YSLDVTYFKS 180
181 SLDSHLLDLL WNKY
|
| Detection Method: | |
| Confidence: | 32.0 |
| Match: | 2o95A |
| Description: | No description for 2o95A was found. |
|
Region A: Residues: [250-358] |
1 11 21 31 41 51
| | | | | |
1 WVNTLSSSPL LGNGDYVAGQ ISDLAEKLEQ AESHLVQSRF GGVVPSSLHK KKEDESQLTK 60
61 ITRDSAKITV EQVHGLMSQV IKDELFNSMR QSNNKSPTDS SDPDPMITY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.864 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.721 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.721 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.646 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.627 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.627 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.600 | N/A | N/A | a.25.3 | Description not found. |
| View | Download | 0.590 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.556 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.529 | N/A | N/A | a.2.7 | tRNA-binding arm |
