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View Structure Prediction Details

Protein: gi|34365625, gi|...
Organism: Arabidopsis thaliana
Length: 98 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34365625, gi|....

Description E-value Query
Range
Subject
Range
gi|7442218, gi|3... - pir||T10223 hypothetical protein T11I11.10 - Arabidopsis thaliana, gi|7270428|emb|CAB80194.1| putati...
137.0 [0..1] [97..1]
gi|7488613, gi|2... - pir||T17020 auxin-induced protein - apple tree, gi|2924327|emb|CAB07785.1| hypothetical protein [Mal...
135.0 [0..1] [94..1]
ARG7_VIGRR - Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1
gi|7442222, gi|2... - pir||T10942 auxin-induced protein 6B - mung bean, gi|287570|dbj|BAA03310.1| ORF [Vigna radiata]
133.0 [0..1] [94..1]
gi|217075552, gi... - gi|92870685|gb|ABE79956.1| Auxin responsive SAUR protein [Medicago truncatula], gi|217075552|gb|ACJ8...
129.0 [0..5] [95..17]
AX10A_SOYBN - Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
128.0 [0..1] [95..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIRISRVLQ SSKQLLKSLS HSSNNVAIPK GHLAVYVGEM MQKRRFVVPV TYLSHPCFQK  60
   61 LLRKAEEEFG FDHPMGGLTI PCTEQIFIDL ASRLSTSS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.886057
Match: PF02519.5
Description: No description for PF02519.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.789 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.754 N/A N/A d.58.49 YajQ-like
View Download 0.754 N/A N/A d.58.49 YajQ-like
View Download 0.735 N/A N/A c.52.1 Restriction endonuclease-like
View Download 0.735 N/A N/A c.52.1 Restriction endonuclease-like
View Download 0.665 N/A N/A d.58.42 N-utilization substance G protein NusG, N-terminal domain
View Download 0.665 N/A N/A d.58.42 N-utilization substance G protein NusG, N-terminal domain
View Download 0.646 N/A N/A d.52.3 Prokaryotic type KH domain (KH-domain type II)
View Download 0.635 N/A N/A d.58.4 Dimeric alpha+beta barrel
View Download 0.631 N/A N/A d.58.42 N-utilization substance G protein NusG, N-terminal domain
View Download 0.520 N/A N/A d.58.42 N-utilization substance G protein NusG, N-terminal domain
View Download 0.402 N/A N/A d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.383 N/A N/A d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.352 N/A N/A d.52.5 Probable GTPase Der, C-terminal domain
View Download 0.314 N/A N/A d.214.1 Hypothetical protein MTH1880


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