| Protein: | gi|21436469, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 421 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21436469, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
342.0 | [0..53] | [421..378] |
|
|
215.0 | [0..17] | [419..2] |
|
|
192.0 | [0..3] | [418..128] |
|
|
188.0 | [0..71] | [410..74] |
|
|
161.0 | [0..1] | [318..2419] |
|
|
150.0 | [0..12] | [331..410] |
|
|
148.0 | [0..12] | [331..424] |
|
|
146.0 | [0..12] | [331..431] |
|
Region A: Residues: [1-326] |
1 11 21 31 41 51
| | | | | |
1 MEEETHDGSL DLQEIRRRVK ELDFFPRNCR EEPVESCSSD YETLVVQDFV LQFEPKVKEI 60
61 VEEYGDVDLL DVEDSDAYLE YLRNELQSVE AESAKVSEEI ERLSQSHAQD SSRLQRDLEG 120
121 LLLSLDSMSS QDVEKSKENQ PSSSSMEVCE VIDDDKFKMF ELENQMEEKR MILKSLEDLD 180
181 SLRKRFDAAE QVEDALTGLK VLEFDGNFIR LQLRTYIQKL DGFLGQHKFD HITEPSELIH 240
241 ELLIYLKDKT TEITKFEMFP NDIYIGDIIE AADSFRQVRL HSAVLDTRSS VQWVVAKVQD 300
301 KIISTTLRKY IVMSSKTIRY TFEYYD
|
| Detection Method: |  |
| Confidence: | 5.39794 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [327-421] |
1 11 21 31 41 51
| | | | | |
1 KDETIVAHIA GGIDAFLKVS DGWPLLNTPL KLASLKNSDN QSKGISLSLI CKVEELANSL 60
61 DLETRQNLSG FMDAIEKILV EQTREELQSN KSSQK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.915 | a.46.1 | Methionine synthase domain |
| View | Download | 0.908 | a.46.1 | Methionine synthase domain |
| View | Download | 0.884 | a.46.1 | Methionine synthase domain |
| View | Download | 0.867 | a.29.12 | Description not found. |
| View | Download | 0.866 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.842 | a.7.14 | Description not found. |
| View | Download | 0.731 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.731 | a.46.1 | Methionine synthase domain |
| View | Download | 0.679 | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.661 | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
