| Protein: | CDF5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDF5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
284.0 | [0..1] | [399..1] |
|
Region A: Residues: [1-233] |
1 11 21 31 41 51
| | | | | |
1 MSKSRDTEIK LFGRTITSLL DVNCYDPSSL SPVHDVSSDP SKEDSSSSSS SCSPTIGPIR 60
61 VPVKKSEQES NKFKDPYILS DLNEPPKAVS EISSPRSSKN NCDQQSEITT TTTTSTTSGE 120
121 KSTALKKPDK LIPCPRCESA NTKFCYYNNY NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG 180
181 RRKNKGWPSS NHYLQVTSED CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKI
|
| Detection Method: |  |
| Confidence: | 1.23 |
| Match: | 1jocA |
| Description: | Eea1; Eea1 homodimerisation domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [234-399] |
1 11 21 31 41 51
| | | | | |
1 SADSVSQENK SYQGFLPPQV MLPNNSSPWP YQWSPTGPNA SFYPVPFYWG CTVPIYPTSE 60
61 TSSCLGKRSR DQTEGRINDT NTTITTTRAR LVSESLRMNI EASKSAVWSK LPTKPEKKTQ 120
121 GFSLFNGFDT KGNSNRSSLV SETSHSLQAN PAAMSRAMNF RESMQQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
