YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|7435106, gi|7...
Organism: Arabidopsis thaliana
Length: 516 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7435106, gi|7....

Description E-value Query
Range
Subject
Range
PPA13_ARATH - Purple acid phosphatase 13 OS=Arabidopsis thaliana GN=PAP13 PE=2 SV=2
400.0 [0..1] [516..1]

Back

Predicted Domain #1
Region A:
Residues: [1-516]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVKYTMSMS FFVIFASTVT IIVHGFPSTL DGPLNPVTAP LDPNLNPIAF DLPESDPSFV  60
   61 KPISEFLLPE QISVSLSYSF DSVWISWVTG EYQIGEKDSA PLDPNCVQSI VQYREFDVRR 120
  121 TRKQNATGHS IVYNQQYSSE NGFMNYTSGI IHHVQLTGLK PNTLYRYQCG DPSLSAMSKE 180
  181 YYFRTMPKST SENYPHRIVV AGDLGLTYNT STVLGHILSN HPDLVVLLGG FSYADTYLAN 240
  241 KTKLDCSSCH CDQNGTSSDC GSCYSSGETY QPRWDYWGRF MEPLTANVPT MMVAGEHEIE 300
  301 PQTENNLTFA AYSSRFAFPS NESADQYIWL ESDLIKINRS ETPWVVATWS LPWYSTFKGH 360
  361 YREAESMRIH LEDLLYNYRV DIVFNSHVDA YERSNRVYNY TLDQCGPVYI TTGAGGAGKL 420
  421 ETQHVDDPGN IPDPSQNYSC RSSGLNSTLE PVKDETCPVK QPEYSAYRES SFGFGILEVK 480
  481 NETHALWSWN RNQDLYYLAA DVIHIVRQPE MCSVCN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.0
Match: 1kbpA
Description: Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.00831575101298 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.821968493634427 bayes_pls_golite062009
catalytic activity 0.632097679642303 bayes_pls_golite062009
phosphatase activity 0.259632720529593 bayes_pls_golite062009
phosphoprotein phosphatase activity 0.0412556599175502 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle