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View Structure Prediction Details

Protein: CCB22_ARATH
Organism: Arabidopsis thaliana
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCB22_ARATH.

Description E-value Query
Range
Subject
Range
gi|114599953 - gi|114599953|ref|XP_517728.2| PREDICTED: cyclin B1 [Pan troglodytes]
330.0 [0..2] [427..113]

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Predicted Domain #1
Region A:
Residues: [1-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNPEENNRN LVVKPITEIL QDDDKRSRKF GVEMKRQNRR ALGVINHNLV GAKAYPCVVN  60
   61 KRRGLSQRKQ ESCDKKKLDS LHPSISRSQE ETKKLKPSGN EFGDCIFIDE EEEKNEEVTL 120
  121 DQPMPMSLEE PYIEFDPMEE EVEMEDMEEE QEEPVLDIDE YDANNS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [167-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LAAVEYVQDL YDFYRKTERF SCVPLDYMAQ QFDISDKMRA ILIDWLIEVH DKFELMNETL  60
   61 FLTVNLIDRF LSKQAVARKK LQLVGLVALL LACKYEEVSV PIVEDLVVIS DKAYTRTDVL 120
  121 EMEKIMLSTL QFNMSLPTQY PFLKRFLKAA QSDKKLEILA SFLIELALVD YEMVRYPPSL 180
  181 LAATAVYTAQ CTIHGFSEWN STCEFHCHYS ENQLLECCRR MVRLHQKAGT DKLTGVHRKY 240
  241 SSSKFGYIAT KYEAAHFLVS DSH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.045757
Match: 2jgzB
Description: No description for 2jgzB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle