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View Structure Prediction Details

Protein: CCA31_ARATH
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCA31_ARATH.

Description E-value Query
Range
Subject
Range
CCA32_ARATH - Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1
294.0 [0..4] [355..3]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEKENCVR MTRAATKRKA SMEAAIDKER INKKRVVLGE LPNLSNIKKS RKATTKQKKK  60
   61 SVSIPTIETL NSDIDTRS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDPQMCGPYV TSIFEYLRQL EVKSRPLVDY IEKIQKDVTS NMRGVLVDWL VEVAEEYKLL  60
   61 SDTLYLAVSY IDRFLSLKTV NKQRLQLLGV TSMLIASKYE EITPPNVDDF CYITDNTYTK 120
  121 QEIVKMEADI LLALQFELGN PTSNTFLRRF TRVAQEDFEM SHLQMEFLCS YLSELSMLDY 180
  181 QSVKFLPSTV AASAVFLARF IIRPKQHPWN VMLEEYTRYK AGDLKECVAM IHDLYLSRKC 240
  241 GALEAIREKY KQHKFKCVAT MPVSPELPLT VFEDVNI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.69897
Match: 2jgzB
Description: No description for 2jgzB was found.

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Created and Maintained by: Michael Riffle