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View Structure Prediction Details

Protein: NRT31_ARATH
Organism: Arabidopsis thaliana
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NRT31_ARATH.

Description E-value Query
Range
Subject
Range
gi|13624657 - gi|13624657|emb|CAC36942.1| putative component of high affinity nitrate transporter [Arabidopsis tha...
386.0 [0..1] [210..1]

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Predicted Domain #1
Region A:
Residues: [1-210]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIQKILFAS LLICSLIQSI HGAEKVRLFK ELDKGALDVT TKPSREGPGV VLDAGKDTLN  60
   61 ITWTLSSIGS KREAEFKIIK VKLCYAPPSQ VDRPWRKTHD ELFKDKTCPH KIIAKPYDKT 120
  121 LQSTTWTLER DIPTGTYFVR AYAVDAIGHE VAYGQSTDDA KKTNLFSVQA ISGRHASLDI 180
  181 ASICFSVFSV VALVVFFVNE KRKAKIEQSK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.978
Match: 2erjB
Description: Crystal structure of the heterotrimeric interleukin-2 receptor in complex with interleukin-2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.319751885094257 bayes_pls_golite062009
protein binding 0.192889436920864 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle