YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: LACS1_ARATH
Organism: Arabidopsis thaliana
Length: 660 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LACS1_ARATH.

Description E-value Query
Range
Subject
Range
gi|115461913, gi... - gi|222630090|gb|EEE62222.1| hypothetical protein OsJ_17009 [Oryza sativa Japonica Group], gi|1255927...
556.0 [0..2] [660..7]

Back

Predicted Domain #1
Region A:
Residues: [1-660]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFAAKVEE GVKGIDGKPS VGPVYRNLLS EKGFPPIDSE ITTAWDIFSK SVEKFPDNNM  60
   61 LGWRRIVDEK VGPYMWKTYK EVYEEVLQIG SALRAAGAEP GSRVGIYGVN CPQWIIAMEA 120
  121 CAAHTLICVP LYDTLGSGAV DYIVEHAEID FVFVQDTKIK GLLEPDCKCA KRLKAIVSFT 180
  181 NVSDELSHKA SEIGVKTYSW IDFLHMGREK PEDTNPPKAF NICTIMYTSG TSGDPKGVVL 240
  241 THQAVATFVV GMDLYMDQFE DKMTHDDVYL SFLPLAHILD RMNEEYFFRK GASVGYYHGN 300
  301 LNVLRDDIQE LKPTYLAGVP RVFERIHEGI QKALQELNPR RRFIFNALYK HKLAWLNRGY 360
  361 SHSKASPMAD FIAFRKIRDK LGGRIRLLVS GGAPLSPEIE EFLRVTCCCF VVQGYGLTET 420
  421 LGGTALGFPD EMCMLGTVGI PAVYNEIRLE EVSEMGYDPL GENPAGEICI RGQCMFSGYY 480
  481 KNPELTEEVM KDGWFHTGDI GEILPNGVLK IIDRKKNLIK LSQGEYVALE HLENIFGQNS 540
  541 VVQDIWVYGD SFKSMLVAVV VPNPETVNRW AKDLGFTKPF EELCSFPELK EHIISELKST 600
  601 AEKNKLRKFE YIKAVTVETK PFDVERDLVT ATLKNRRNNL LKYYQVQIDE MYRKLASKKI 660
  661 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 2p2bA
Description: No description for 2p2bA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle