YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15217824, gi|...
Organism: Arabidopsis thaliana
Length: 513 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217824, gi|....

Description E-value Query
Range
Subject
Range
gi|33640682, gi|... - gi|33862569|ref|NP_894129.1| TPR repeat-containing protein [Prochlorococcus marinus str. MIT 9313], ...
224.0 [0..2] [484..522]

Back

Predicted Domain #1
Region A:
Residues: [1-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIHPWWKRN RKKVDKYMKN AKDLITSQDP NDIVSALSLL NSTLSISPHH ELALELKARS  60
   61 LLYLRRFKDV AVLLHNYIPS LRIDNEDVSS VFAASSELSS LMLLLPSGSP SHDSSFKCFS 120
  121 YSYLKKKVMA GLSNNSQVQG QWRYLVLGQA CYHLGLMDDA IILLQTGKRL ATAELRRESI 180
  181 CWSEDSFNLS TSESQPQPIT ESEIVSQMLS QTKLFLRRRT AALAALDAGL YSESIRHFSK 240
  241 IIDSRRGAPQ SFLVYCLIRR AFAYKSAGRI ADSIADCNLI LALEPSCIEA LETRAELFRS 300
  301 IRCFPDSLHD LEHLKLLFNS ILRDRSLTGP VWKRHNVRYR EIPGKLCVLT TNIKQMKEKI 360
  361 TNRENGNEDY YSLMGIERGC SRSELNRAYL LLNLRYKSER SMTSIDRFDI IDEQELVSVK 420
  421 NRARMSTLLL YRLIQKGYYA VLSDIETVEA DKAVAIDNRR IETPMDGNKA VAMTVVRKSN 480
  481 DKLDVVVKGV FCRDMAAVGS LISRAGLRQP ITV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 2gw1A
Description: No description for 2gw1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle