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View Structure Prediction Details

Protein: ACP5_ARATH
Organism: Arabidopsis thaliana
Length: 139 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACP5_ARATH.

Description E-value Query
Range
Subject
Range
gi|75907835, gi|... - gi|75907835|ref|YP_322131.1| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi|757...
160.0 [0..4] [135..1013]

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Predicted Domain #1
Region A:
Residues: [1-60]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSFCSSIS MQAPFSATTT RFCLNKQATI FNNEKTNNLS FSLRRLMPAR LAVSCAVKQE  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 19.154902
Match: 1amuA
Description: Phenylalanine activating domain of gramicidin synthetase 1
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [61-139]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVEKVSEIVK KQLSLTDDQK VTAGTKFTEL GADSLDTVEI VMGLEEEFGI TMAEERAKEI  60
   61 ATVQQAAELI EELVQEKTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.39794
Match: 2ehsA
Description: No description for 2ehsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle