| Protein: | FIMB3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 714 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIMB3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
493.0 | [0..1] | [714..1] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MSGFVGVIVS DPWLQSQLTQ VELRSLNSKF VALKNQSGKV TLEDLPSVLV KVKSLSSSFK 60
61 EKEIKEILGG LGSDYESDDD LDFESFLKVY LNLRDKAADK AGGGLKHSSS FLKAGTT
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [118-622] |
1 11 21 31 41 51
| | | | | |
1 TLHTINQSEK GSFVLHINRY LGDDPFLKQF LPLDPDSNDL YELVKDGVLL CKLINIAVPG 60
61 TIDERAINTK RVLNPWERNE NHTLCLNSAK AVGCSVVNIG TQDLAEGRPH LVLGLISQLI 120
121 KIQLLADLSL KKMPQLVELV EDNEDIEEFL RLPPEKVLLK WMNFHLKKGG YKKTVGNFSS 180
181 DLKDAQAYAY LLNVLAPEHC DPATLNAEDD LERANMVLEH AERMNCKRYL TAEEIVEGSS 240
241 YLNLAFVAQI FHERNGLSTD GRFSFAEMMT EDLQTCRDER CYRLWINSLG IESYVNNVFE 300
301 DVRNGWILLE VVDKVYPGSV NWKQASKPPI KMPFRKVENC NQVVKIGKEM RFSLVNVAGN 360
361 DIVQGNKKLI LGFLWQLMRT HMLQLLKSLR SRTRGKDMTD SEIISWANRK VRIMGRKSQI 420
421 ESFKDKSLSS GLFFLDLLWA VEPRVVNWNL VTKGESDDEK RLNATYIVSV ARKLGCSVFL 480
481 LPEDIVEVNQ KMILILTASI MYWSL
|
| Detection Method: | |
| Confidence: | 115.0 |
| Match: | 1pxyA |
| Description: | Crystal structure of the actin-crosslinking core of Arabidopsis fimbrin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
|
Region A: Residues: [623-714] |
1 11 21 31 41 51
| | | | | |
1 QQQSSSSESS SSSSDSSSTH STTTTCTSTC TSTDASPAPS VTGEDEVSSL NGEVSSLTIE 60
61 EDNEVSSLTI EEDNDADILS DITSISEEAA NE
|
| Detection Method: | |
| Confidence: | 66.154902 |
| Match: | 1sjjA |
| Description: | Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin |
Matching Structure (courtesy of the PDB): |
|
