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View Structure Prediction Details

Protein: gi|15242863, gi|...
Organism: Arabidopsis thaliana
Length: 510 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15242863, gi|....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
594.0 [0..4] [509..87]

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Predicted Domain #1
Region A:
Residues: [1-510]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNIDIEGIL KELPNDGRTP KTKIVCTLGP ASRSVTMIEK LLKAGMNVAR FNFSHGSHEY  60
   61 HQETLDNLRT AMQNTGILAA VMLDTKGPEI RTGFLKDGNP IQLKEGQEIT ITTDYDIKGD 120
  121 EKTISMSYKK LPVDVKPGNT ILCADGSISL AVVSCDPNAG TVICRCENTA MLGERKNVNL 180
  181 PGVVVDLPTL TDKDVEDILK WGVPNNIDMI ALSFVRKGSD LVNVRKVLGS HSKSIMLMSK 240
  241 VENQEGVLNF DEILRETDAF MVARGDLGME IPIEKIFLAQ KMMIYKCNLA GKPVVTATQM 300
  301 LESMIKSPRP TRAEATDVAN AVLDGTDCVM LSGESAAGAY PEIAVKTMAK ICIEAESSLD 360
  361 YNTIFKEMIR ATPLPMSTLE SLASSAVRTA NKAKAKLIIV LTRGGTTAKL VAKYRPAVPI 420
  421 LSVVVPVFTS DTFNWSCSDE SPARHSLIYR GLIPVLGEGS AKATDSESTE EIIESALKSA 480
  481 TEKGLCNHGD AVVALHRIGA ASVIKICVVK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 168.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle